BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D08SP1|AL430535
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1398 1896 0.0
>3x_Contig1398
Length = 9161
Score = 1896 bits (956), Expect = 0.0
Identities = 964/966 (99%), Gaps = 1/966 (0%)
Strand = Plus / Plus
Query: 1 gatcaggatcgatcgatgtagcggcggcagtggcaccagatgtctctgcatttattggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5269 gatcaggatcgatcgatgtagcggcggcagtggcaccagatgtctctgcatttattggtc 5328
Query: 61 cagtttctggcacagaaactgagcttgccacggtatggctcgcagtagatccactggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5329 cagtttctggcacagaaactgagcttgccacggtatggctcgcagtagatccactggtag 5388
Query: 121 tagcagcagcaactgaactacacaatggatcttcaggtcgtagaaacgaggcaccttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5389 tagcagcagcaactgaactacacaatggatcttcaggtcgtagaaacgaggcaccttgtg 5448
Query: 181 ctgggtgaaattccactaatttgttaagttgtgataatgcaatgcgaaaggtgataattg 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5449 ctgggtgaaattccactaatttgttaagttgtgataatg-aatgcgaaaggtgataattg 5507
Query: 241 gtactcagcaatcgattctgaataatcttgtacacagttggtgattggtacactgccgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5508 gtactcagcaatcgattctgaataatcttgtacacagttggtgattggtacactgccgaa 5567
Query: 301 ccaataacatagtagtctcggagtgttgtcgtcttggtaggcccatctcgttgctgtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 ccaataacatagtagtctcggagtgttgtcgtcttggtaggcccatctcgttgctgtttt 5627
Query: 361 ctaattatccaaaggtctggttcccgtactagaactaatatgtactcaattcctttcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628 ctaattatccaaaggtctggttcccgtactagaactaatatgtactcaattcctttcatc 5687
Query: 421 ttcattaattccttttcgagcattgcatgtactggataacgttcccatatcaaactacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5688 ttcattaattccttttcgagcattgcatgtactggataacgttcccatatcaaactacga 5747
Query: 481 tcagaaggagatactgtaccagcaccagcmgcagcgccaatgccgctgctacttcccaag 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5748 tcagaaggagatactgtaccagcaccagcagcagcgccaatgccgctgctacttcccaag 5807
Query: 541 ggcatactacctggaacctgactctgctgtgagaattgttgctgcatcttgaccacttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5808 ggcatactacctggaacctgactctgctgtgagaattgttgctgcatcttgaccacttgg 5867
Query: 601 ttgtttgaagtcttgtcaaaaaatggtgactcgctaaagtagtctagcacattgtcagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5868 ttgtttgaagtcttgtcaaaaaatggtgactcgctaaagtagtctagcacattgtcagta 5927
Query: 661 tgtagcccaaacgtttggatccattctggggatttccattgcaattcatctaacggtggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 tgtagcccaaacgtttggatccattctggggatttccattgcaattcatctaacggtggt 5987
Query: 721 aatgacatctgtcaattattttatgtccagtttttgtgtttctattccagtttattctaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 aatgacatctgtcaattattttatgtccagtttttgtgtttctattccagtttattctaa 6047
Query: 781 attcgtgcatttattctcgatcacttagatttacgattcgaattatttgaatatcatctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 attcgtgcatttattctcgatcacttagatttacgattcgaattatttgaatatcatctt 6107
Query: 841 taattgcagtttaatattggttttcatcaaaacctttaatttgaatcaagaaaaaattat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 taattgcagtttaatattggttttcatcaaaacctttaatttgaatcaagaaaaaattat 6167
Query: 901 gcaaaattttatcatgcagaagagcatagataaaggaatgaagtggaatcgtattaagca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6168 gcaaaattttatcatgcagaagagcatagataaaggaatgaagtggaatcgtattaagca 6227
Query: 961 acaata 966
||||||
Sbjct: 6228 acaata 6233
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7140
Number of Sequences: 1807
Number of extensions: 7140
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)